Skip to content

Issues: SpatialHackathon/SpaceHack2023

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

58 Open 97 Closed
58 Open 97 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Cross_method_entriopy, Cross_method_ARI, Smoothness_entropy python version
#346 opened Jan 22, 2025 by Jieran-S
Improve Cross-method-entropy to allow non-equal cluster-number instances
#345 opened Jan 22, 2025 by Jieran-S
2 tasks
Test consensus part of the workflow
#344 opened Jan 22, 2025 by Jieran-S
2 tasks
(Discusssion)Adding a master snakemakem file to run all the workflow in one click
#343 opened Jan 22, 2025 by Jieran-S
(Long term) Increase the reproducibility of the workflow
#342 opened Jan 22, 2025 by Jieran-S
fix deepST bug Something isn't working
#340 opened Jan 20, 2025 by heylf
README: Schematic workflow and webpage
#339 opened Jan 20, 2025 by Jieran-S
@niklasmueboe
Do we still need the preprocessing steps?
#336 opened Jan 9, 2025 by Jieran-S
2
README: Scability recommendation and snakemake specification
#335 opened Jan 6, 2025 by Jieran-S
Fix: Trim github branches
#333 opened Jan 6, 2025 by Jieran-S
@niklasmueboe
1
README: Update instruction for customization
#330 opened Jan 6, 2025 by Jieran-S
@heylf
2
README: A quick example to get started
#329 opened Jan 6, 2025 by Jieran-S
@heylf
2
Fix: Update the workflow part handling additional installation requirement.
#328 opened Jan 6, 2025 by Jieran-S
data_split_abc_atlas_into_two
#318 opened Jul 11, 2024 by meghanaturner
@meghanaturner
2
Methods: Regular neighboring function to technology adaptability
#300 opened May 27, 2024 by Jieran-S
data_visium_breast_cancer data Visium
#251 opened Mar 21, 2024 by kbiharie
@kbiharie
1
Path encoding for cross-method utility functions enhancement New feature or request help wanted Extra attention is needed
#234 opened Feb 26, 2024 by Jieran-S
Matched label returns NaN in metric calculation bug Something isn't working help wanted Extra attention is needed metric
#215 opened Feb 19, 2024 by Jieran-S
3
simulated_data_Giotto data metric R simulation
#145 opened Dec 14, 2023 by pfeiferl
@pfeiferl
data_kidney_KPMP_VISIUM data Visium
#101 opened Dec 13, 2023 by FADHLyemen
@FADHLyemen
6
method_Voyager method python R
#93 opened Dec 12, 2023 by geogav
@geogav
performance_vs_read_depth data metric simulation
#89 opened Dec 10, 2023 by naveedishaque
@vucinick
scaling_with_image_size data metric simulation
#88 opened Dec 10, 2023 by naveedishaque
@rasools
domain_specific_metric_calculations metric
#86 opened Dec 10, 2023 by naveedishaque
1
@markrobinsonuzh
2
train_a_regressor simulation
#85 opened Dec 10, 2023 by naveedishaque
@ahmedmahfouz
ProTip! Exclude everything labeled bug with -label:bug.